TY  - BOOK
AU  - Altman,Russ B.
AU  - Dunker,A Keith
AU  - Hunter,Lawrence
AU  - Ritchie,Marylyn D.
AU  - Murray,Tiffany A.
AU  - Klein,Teri E.
TI  - Pacific Symposium On Biocomputing 2015
SN  - 9789814644730
PY  - 2014///
CY  - Singapore
PB  - World Scientific Publishing Company
KW  - Electronic books
N1  - Intro -- 2PSB20AnniversaryFinalv2 -- all-cp -- 0intro-cancerpanomics -- ching -- deshwar -- jang -- lehman -- nasser -- wu -- all-cp -- 0intro-cancerpathways -- engin -- kim -- 1.   Introduction -- 2.   Methods -- 2.1.   Data -- 2.2.   BioBin -- 2.3.   ATHENA -- 2.4.   Grammatical Evolution Neural Networks (GENN) -- 2.5.   Survival fitness function -- 2.6.   Experiment setup -- 3.   Results and Discussion -- 3.1.   Binning somatic mutations using BioBin -- 3.2.   GENN modeling for somatic mutation burden -- 3.3.   Biological interpretation -- 4.   Conclusions -- Acknowledgments -- lockwood -- poon -- tan -- yang -- all-interactions -- 1intro-interactions -- crawford -- darabos -- frost -- holzinger -- Holzinger_PSB2015_r2VIM_1Oct2014 -- 1.   Introduction -- 1.1.   Variable selection that allows for interactions -- 2.   Methods -- 2.1.   r2VIM -- 2.2.   Data Simulation -- 3.   Results -- 3.1.   Simulated Data -- 4.   Discussion -- hu -- jeff -- patel -- restrepo -- wang -- all-crowd -- 1intro-crowdsourcing -- binder -- good -- irshad -- odgers -- waldispuhl -- all-pm -- 0intro-pm -- birol -- chang -- diggans -- fan-minogue -- glicksberg -- hinterberg -- huang -- makashir -- 2.   Methods -- 2.1.   Statistical framework for meta-analysis of differential co-expression -- 2.1.1.     s score definition -- 2.1.2.   Probability distribution of s scores -- 2.2.   SLE dataset selection for meta-analysis -- 2.3.   Data pre-processing -- 2.4.   Meta-analysis of differential gene co-expression in SLE -- 2.5.   Comparison of Type I error rates and statistical power -- 2.6.   Differential expression analysis -- 2.7.   Identification and annotation of gene modules -- 3.   Results -- 3.1.   A network of genes specifically co-expressed in SLE -- 3.2.   Gene co-expression modules specific to SLE -- 3.2.1.   Type I interferon response; 3.2.2.   Cell movement and response to wounding -- 3.2.3.   Immune defense against extracellular organisms -- 4.   Discussion -- 5.   Conclusions -- nie -- sengupta -- all-wkshop -- 1wkshop-human -- 2wkshop-discovery -- 3wkshp-public -- 4wkshop-bioinfo -- 5psb15-erratum
UR  - https://ebookcentral.proquest.com/lib/ostimteknik/detail.action?docID=6383191
ER  -